IFB Insights From BioData
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What I offer

Primary

RNA-seq Differential Expression

DESeq2-style workflows with QC summaries, filtered count matrices, normalized counts, DEG tables, PCA, heatmaps, volcano plots, and concise reports.

Splicing

Alternative Splicing Review

rMATS workflow notes, exon skipping and junction-level summaries, event filtering, and sashimi plot preparation for selected genes.

Figures

Publication-Ready Visuals

PCA, sample-distance heatmaps, DEG heatmaps, volcano plots, pathway plots, expression summaries, and clean figure exports for manuscript workflows.

Pathways

Functional Interpretation

GSEA and enrichment-oriented summaries that translate ranked gene lists or DEG sets into readable pathway-level research notes.

Also available: small Python/Bash helpers for repetitive lab data tasks.

Project packages

Starter

Figure Cleanup

Typical time: 2-3 days.

Best for teams that already have tables and need polished scientific figures.

  • PCA, heatmap, volcano, or pathway figure
  • Clean labels, legends, and export formats
  • Short figure note for methods/report use
Core

RNA-seq Result Pack

Typical time: 5-7 days.

Best for a focused differential expression comparison with reusable outputs.

  • QC-aware DEG workflow and result tables
  • PCA, heatmap, volcano, and selected summaries
  • Concise methods and interpretation report
Advanced

Splicing / Pathway Review

Time depends on scope.

Best for deeper review around events, genes, pathways, or selected biology.

  • rMATS-style event filtering
  • Selected sashimi or pathway-level visuals
  • Structured handoff of tables and scripts

Pricing depends on dataset size and scope. Send a brief to get a quote.

What to expect from a delivery

Clear outputs and a traceable analysis trail for each project.

Publication-ready figures

Plots are made for manuscripts and reports, with clean labels and export formats.

Downloadable files

Deliverables typically include tables, figures, scripts, and method notes you can reuse.

Reproducible analysis trail

Inputs, contrasts, filtering choices, and output names are made explicit before delivery.

Research-only boundary

Clinical diagnosis, treatment decisions, and patient-specific interpretation remain out of scope.